DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab9a

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_445910.2 Gene:Rab9a / 84589 RGDID:619740 Length:201 Species:Rattus norvegicus


Alignment Length:160 Identity:56/160 - (35%)
Similarity:88/160 - (55%) Gaps:6/160 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |||:::|||.|||||.|:.|:..::|..:...|:|::...:.:|:....:.:|:|||:|.:||.|
  Rat     7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRS 71

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNKSDDPNHRQVSM 132
            |....||.:...||.:.:..|:||||:..|.||.....    |:....:::|||: |...||||.
  Rat    72 LRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKT-DIKERQVST 135

  Fly   133 EQGFNYA-HRGALGFEEVSAKSGMNVYDIF 161
            |:...:. ..|...:.|.|||...||...|
  Rat   136 EEAQAWCKDNGDYPYFETSAKDSTNVAAAF 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 55/159 (35%)
Rab9aNP_445910.2 Rab9 3..172 CDD:206697 56/160 (35%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51151 31..42 2/10 (20%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51151 64..78 5/13 (38%)

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