DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABG3d

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_175638.1 Gene:RABG3d / 841658 AraportID:AT1G52280 Length:206 Species:Arabidopsis thaliana


Alignment Length:189 Identity:65/189 - (34%)
Similarity:102/189 - (53%) Gaps:19/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||||||:.|:.:|.:.:|:.:|..|:|.|...:.|::..|:..||:|||:|.:||.|
plant     8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQERFQS 72

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNKSD-DPNHRQVS 131
            |..:.||.|...:||||:...|||.|::.|.:|.....    |:....:::|||:| |....:|.
plant    73 LGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGKSRVV 137

  Fly   132 MEQGFN--YAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEE 188
            .|:...  .|.:|.:.:.|.|||.|.||...|..:..:.:            .:|.|||
plant   138 SEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAF------------KNEPEEE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/163 (37%)
RABG3dNP_175638.1 Rab7 9..182 CDD:206655 61/184 (33%)

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