DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABG3E

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_175355.1 Gene:RABG3E / 841353 AraportID:AT1G49300 Length:206 Species:Arabidopsis thaliana


Alignment Length:189 Identity:66/189 - (34%)
Similarity:106/189 - (56%) Gaps:19/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||||||:.|:.::.:.:|:.:|..|:|.|...:.|:...|:..||:|||:|.:||.|
plant     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQS 72

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNK--SDDPNHRQV 130
            |..:.||.|...:||||:.|:|||::::.|.:|.....    |:....:::|||  .|..:.|.|
plant    73 LGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPFVVIGNKIDVDGGSSRVV 137

  Fly   131 SMEQGFNY-AHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEE 188
            |.::...: |.:|.:.:.|.|||.|.||.|.|..:.            .:.|.|.:|||
plant   138 SEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCIT------------TNAMKSGEEEE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/163 (37%)
RABG3ENP_175355.1 Rab7 9..182 CDD:206655 62/184 (34%)

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