DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA1i

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_174177.1 Gene:RABA1i / 839755 AraportID:AT1G28550 Length:218 Species:Arabidopsis thaliana


Alignment Length:189 Identity:70/189 - (37%)
Similarity:113/189 - (59%) Gaps:8/189 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :||||||::.||||||||.||.||:.:.|:.....|:|::...||::...:::..|:|||:|.:|
plant    10 YDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQER 74

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.|||||:|...:|:|::.|:||:|......:.::|||||:|..:.|.:|.|
plant    75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAISTE 139

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVL-------HNPISPMPSEQ 185
            :...:|.|....|.|.||...:||.:.|:.:...|| |.|.       .:|.:.:|..|
plant   140 EAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIY-RVVSKKALEAGDDPTTALPKGQ 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/156 (38%)
RABA1iNP_174177.1 Rab11_like 11..175 CDD:206660 63/163 (39%)

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