DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABG3B

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_173688.1 Gene:RABG3B / 838880 AraportID:AT1G22740 Length:203 Species:Arabidopsis thaliana


Alignment Length:179 Identity:68/179 - (37%)
Similarity:108/179 - (60%) Gaps:16/179 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||||||:.|:.::.:::|:::|..|:|.|...:.:::..|::.||:|||:|.:||.|
plant     8 LLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQS 72

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKE-IRRMCP-DKVT--VLLVGNK--SDDPNHRQV 130
            |..:.||.|...:||||:...|||:::|.|..| :.|..| |.:.  .:|:|||  .|..|.|.|
plant    73 LGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVV 137

  Fly   131 SMEQGFNY-AHRGALGFEEVSAKSGMNVYDIF---SSLAM------DIY 169
            |.::...: |.:|.:.:.|.|||...||.|.|   :.||:      |||
plant   138 SEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQDIY 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 62/166 (37%)
RABG3BNP_173688.1 Rab7 9..180 CDD:206655 64/170 (38%)

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