DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA6b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_173258.2 Gene:RABA6b / 838399 AraportID:AT1G18200 Length:229 Species:Arabidopsis thaliana


Alignment Length:179 Identity:74/179 - (41%)
Similarity:104/179 - (58%) Gaps:4/179 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            |||||.:::|||.||||.||.|||.|.|......|:|:|...|:|.:..:.:..|:|||:|.:||
plant    11 DYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQERF 75

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            .::..|.||.|.|.||:||||...:|:||:.|:.|:|.....:..|:|||||||....|:|..|:
plant    76 RAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSDLGQSREVEEEE 140

  Fly   135 GFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIY----HRYVLHNPIS 179
            |...|....|.|.|.||....||.:.|.|:...|:    .:.||.|.::
plant   141 GKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDNRLN 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 67/156 (43%)
RABA6bNP_173258.2 Rab11_like 11..175 CDD:206660 70/163 (43%)

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