DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA1b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_173136.1 Gene:RABA1b / 838263 AraportID:AT1G16920 Length:216 Species:Arabidopsis thaliana


Alignment Length:166 Identity:69/166 - (41%)
Similarity:107/166 - (64%) Gaps:0/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :||||||:::||||||||.||.||:.:.|..:...|:|::...|::::..:|:..|:|||:|.:|
plant    10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQER 74

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.|||||:|...:|:|:|.|:||::......:.|:|||||||..:...|..|
plant    75 YRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTE 139

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIY 169
            .|.:||.:.:|.|.|.||....||.|.|:.:...||
plant   140 DGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIY 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 64/156 (41%)
RABA1bNP_173136.1 Rab11_like 11..175 CDD:206660 67/163 (41%)

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