DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and ARA-2

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_172128.1 Gene:ARA-2 / 837151 AraportID:AT1G06400 Length:216 Species:Arabidopsis thaliana


Alignment Length:192 Identity:66/192 - (34%)
Similarity:111/192 - (57%) Gaps:10/192 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|||||::::||||||||.||.||:.:.|..:...|:|::...::.::..:|:..|:|||:|.:|
plant    10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 74

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.||:||:|...:|:|...|::|:|......:.|:|:|||.|..:...|..|
plant    75 YRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTE 139

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAESPD 195
            :...:|.|.:|.|.|.||....||.:.|:.:...| |:.|         |::..:...||.|
plant   140 EAKAFAERESLYFMETSALDATNVENAFTEVLTQI-HKIV---------SKRSVDGGGESAD 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 56/156 (36%)
ARA-2NP_172128.1 Rab11_like 11..175 CDD:206660 60/164 (37%)

Return to query results.
Submit another query.