DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA5E

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_563750.3 Gene:RABA5E / 837091 AraportID:AT1G05810 Length:264 Species:Arabidopsis thaliana


Alignment Length:166 Identity:65/166 - (39%)
Similarity:102/166 - (61%) Gaps:0/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            :||||::|:|||.||||.||.|::.:.|:.....|:|::.:.:|:|:..:.:..|:|||:|.:||
plant    56 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERF 120

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            .::..:.||.|.|.|:|||||...:|:::..|:.|::......|..:|||||.|..|.|.||:|:
plant   121 RAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEE 185

  Fly   135 GFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYH 170
            |...|....|.|.|.||....||...|..:.:|||:
plant   186 GKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYN 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/156 (38%)
RABA5ENP_563750.3 Rab11_like 56..220 CDD:206660 63/163 (39%)

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