DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and RABA1f

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_200894.1 Gene:RABA1f / 836207 AraportID:AT5G60860 Length:217 Species:Arabidopsis thaliana


Alignment Length:166 Identity:66/166 - (39%)
Similarity:105/166 - (63%) Gaps:0/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :||||||:::||||||||.||.||:.:.|:.:...|:|::...||:.:..:::..|:|||:|.:|
plant    10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.|||||:|...:|:|::.|:||:|......:.::.||||:|..:.|.||.|
plant    75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTE 139

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIY 169
            ....:|.|....|.|.||...|||.:.|:.:...||
plant   140 DAKAFAERENTFFMETSALESMNVENAFTEVLSQIY 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/156 (39%)
RABA1fNP_200894.1 Rab11_like 11..175 CDD:206660 64/163 (39%)

Return to query results.
Submit another query.