DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA2D

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_200723.1 Gene:RABA2D / 836033 AraportID:AT5G59150 Length:217 Species:Arabidopsis thaliana


Alignment Length:198 Identity:69/198 - (34%)
Similarity:113/198 - (57%) Gaps:11/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSH-----FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQV 60
            |:|     :|||||::::|||||||:.:|.||:.:.|..:...|:|::...|::::..:.:..|:
plant     1 MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65

  Fly    61 WDTSGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDP 125
            |||:|.:|:.::..:.||.|.|.|||||||..::|.|:..|::|:|......:.:::.|||:|..
plant    66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLN 130

  Fly   126 NHRQVSMEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDA 190
            :.|.|:.|.|...|....|.|.|.||....||...|.::..:|||      .||......:|..|
plant   131 HLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYH------IISKKALAAQEAAA 189

  Fly   191 AES 193
            |.|
plant   190 ANS 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 55/156 (35%)
RABA2DNP_200723.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..217 CDD:476819 69/198 (35%)

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