DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA4C

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_199607.1 Gene:RABA4C / 834847 AraportID:AT5G47960 Length:223 Species:Arabidopsis thaliana


Alignment Length:201 Identity:70/201 - (34%)
Similarity:113/201 - (56%) Gaps:12/201 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHF--------DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMM 57
            ||.|        ||:|||:::|||.||||.||.|||.:.|:.:...|:|::.:.|::|:..:.:.
plant     1 MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIK 65

  Fly    58 LQVWDTSGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKS 122
            .|:|||:|.:|:.::..:.||.|.|.:||||||..:||.::..|::|:|......:.::|:|||:
plant    66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKT 130

  Fly   123 DDPNHRQVSMEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEE 187
            |....|.|..|....:|.|..|.|.|.||....||...|.::..:||......|    :.:.:|.
plant   131 DLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKN----LVANEEG 191

  Fly   188 EDAAES 193
            |...:|
plant   192 ESGGDS 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/156 (38%)
RABA4CNP_199607.1 Rab11_like 13..177 CDD:206660 61/163 (37%)

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