DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA5a

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_199563.1 Gene:RABA5a / 834802 AraportID:AT5G47520 Length:221 Species:Arabidopsis thaliana


Alignment Length:188 Identity:69/188 - (36%)
Similarity:110/188 - (58%) Gaps:5/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            |||||::::|||.||||.||.||:.|.|......|:|::.:.:.:::..:.:..|:|||:|.:||
plant    12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERF 76

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            .::..:.||.|.|.||||||:..::|.:|..|:.|:.......|..:|||||||..:.|:||..:
plant    77 RAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKDLREVSTAE 141

  Fly   135 GFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQ-EEEDAA 191
            |...|....|.|.|.||....||...|.::..:||:  :|...:  |.|:: .::|.|
plant   142 GKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYN--ILSRKV--MSSQELNKQDPA 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/156 (38%)
RABA5aNP_199563.1 Rab11_like 12..176 CDD:206660 62/163 (38%)

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