DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RHA1

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001330210.1 Gene:RHA1 / 834549 AraportID:AT5G45130 Length:208 Species:Arabidopsis thaliana


Alignment Length:169 Identity:62/169 - (36%)
Similarity:97/169 - (57%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSLM 73
            ||| |||.|.|||.|::||..|:|.|....|:|....::::.:....:..::|||:|.:|::||.
plant    21 KVL-LGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLA 84

  Fly    74 PSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFNY 138
            |..||.|...::|:|||:..||:....|::|::......:.:.|.|||:|..:.|:||.|:...|
plant    85 PMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIY 149

  Fly   139 AHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNP 177
            |...:|.|.|.|||:..||.|||..:|..:.......||
plant   150 AQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENP 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/155 (38%)
RHA1NP_001330210.1 Rab5_related 22..180 CDD:206653 59/158 (37%)

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