DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RAB33B

DIOPT Version :9

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_011530601.1 Gene:RAB33B / 83452 HGNCID:16075 Length:277 Species:Homo sapiens


Alignment Length:191 Identity:62/191 - (32%)
Similarity:110/191 - (57%) Gaps:5/191 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF-N 70
            :||::|:|||.|||:||..||...||.::...|:|:|.:.|:||:....:.:|:|||:|.:|| .
Human    81 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRK 145

  Fly    71 SLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRR-MCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            |::...||:.|.::.|||:|:..||.::..|::|.:: :..:.:..:|||||.|..:..||..:.
Human   146 SMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDL 210

  Fly   135 GFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAESPD 195
            ...:|...::...|.|||: .|..|...::.|.:.|:...|.|:  |.|:..:......|:
Human   211 AQKFADTHSMPLFETSAKN-PNDNDHVEAIFMTLAHKLKSHKPL--MLSQPPDNGIILKPE 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 RAB 8..171 CDD:197555 56/164 (34%)
Rab 8..165 CDD:206640 55/158 (35%)
RAB33BXP_011530601.1 Rab33B_Rab33A 80..249 CDD:133315 57/168 (34%)
RAB 82..248 CDD:197555 57/166 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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