DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABH1e

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_196588.3 Gene:RABH1e / 830890 AraportID:AT5G10260 Length:207 Species:Arabidopsis thaliana


Alignment Length:185 Identity:67/185 - (36%)
Similarity:109/185 - (58%) Gaps:8/185 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            :|::.|||..|||:.::.||..|:|...|..|:|||..::::.|..|.:.||:|||:|.:||.||
plant    10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 74

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            :||..|.:...::|||:.:.:||.|...|::::|......|.::|||||:|..:.||||:|:|.|
plant    75 IPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDN 139

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAE 192
            .|....:.|.|.|||:|.|:..:|..:|..:        |.....|..::||..:
plant   140 KARDYGVIFIETSAKAGFNIKPLFRKIAAAL--------PGMETLSSTKQEDMVD 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 62/156 (40%)
RABH1eNP_196588.3 Rab6 10..170 CDD:206654 63/159 (40%)

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