DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA1d

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_193615.1 Gene:RABA1d / 827614 AraportID:AT4G18800 Length:214 Species:Arabidopsis thaliana


Alignment Length:167 Identity:68/167 - (40%)
Similarity:106/167 - (63%) Gaps:0/167 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :||||||:::||||||||.||.||:.:.|:.:...|:|::...||:.:..:|:..|:|||:|.:|
plant    10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQER 74

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.|||||:|...:|:|::.|::|:|......:.|:|||||||..:...|..|
plant    75 YRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTE 139

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYH 170
            ...::|...:|.|.|.||....||.:.||.:...|||
plant   140 DAKSFAENESLYFMETSALESTNVENAFSEVLTQIYH 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 62/156 (40%)
RABA1dNP_193615.1 Rab11_like 11..175 CDD:206660 65/163 (40%)

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