DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA1e

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_193578.1 Gene:RABA1e / 827574 AraportID:AT4G18430 Length:217 Species:Arabidopsis thaliana


Alignment Length:181 Identity:70/181 - (38%)
Similarity:110/181 - (60%) Gaps:3/181 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|||||::::||||||||.||.||:.:.|:.:...|:|::...|||.:..:::..|:|||:|.:|
plant    10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQER 74

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.|||||||...:|:|::.|:||:|......|.::|||||:|..:.|.|..|
plant    75 YRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLRHLRAVPTE 139

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYH---RYVLHNPISPM 181
            :..:::.|..:.|.|.||....||...|:.:...||.   |..|.....||
plant   140 EARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDPM 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/156 (39%)
RABA1eNP_193578.1 Rab11_like 11..175 CDD:206660 64/163 (39%)

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