DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABB1a

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_193449.1 Gene:RABB1a / 827427 AraportID:AT4G17160 Length:205 Species:Arabidopsis thaliana


Alignment Length:168 Identity:68/168 - (40%)
Similarity:107/168 - (63%) Gaps:0/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :.|.||.:::||:||||||||::|:|.||...:..|:|::..|:::.:.::.:.||:|||:|.:.
plant     3 YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDTAGQES 67

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.|:..|.||...|.|||||||..::|.::..|::|.|:...:.:|.:|:|||.|..:.|.||.|
plant    68 FRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCDLEDKRTVSTE 132

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHR 171
            :|..:|....|.|.|.|||:..||.:.|...|..||.|
plant   133 EGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKR 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 63/156 (40%)
RABB1aNP_193449.1 PLN03108 1..204 CDD:178655 68/168 (40%)

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