DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and RAB8

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_190929.1 Gene:RAB8 / 824529 AraportID:AT3G53610 Length:216 Species:Arabidopsis thaliana


Alignment Length:169 Identity:81/169 - (47%)
Similarity:113/169 - (66%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|||.|:|::|||||||||||:||||..||..::.|:|||.|.|::||..:.:.||:|||:|.:|
plant    12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSD-DPNHRQVSM 132
            |.::..:.||.|.|||||||:|...||.||..|::.|.:...|.|..:|||||:| |.:.|.|..
plant    77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPK 141

  Fly   133 EQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHR 171
            .:|...|....:.|.|.|||:.:||.::|.|:|.||..|
plant   142 SKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 74/157 (47%)
RAB8NP_190929.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 80/166 (48%)

Return to query results.
Submit another query.