DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA2c

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_190267.1 Gene:RABA2c / 823836 AraportID:AT3G46830 Length:217 Species:Arabidopsis thaliana


Alignment Length:198 Identity:71/198 - (35%)
Similarity:114/198 - (57%) Gaps:11/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSH-----FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQV 60
            |:|     :|||||::::||||||||.:|.||:.:.|..:...|:|::...|:.::..:.:..|:
plant     1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65

  Fly    61 WDTSGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDP 125
            |||:|.:|:.::..:.||.|.|.|||||||..::|.|:..|::|:|......:.:::.|||||..
plant    66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLN 130

  Fly   126 NHRQVSMEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDA 190
            :.|.|:.|.|.:.|.:..|.|.|.||....||...|.::..:|||      .||......:|..|
plant   131 HLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYH------IISKKALAAQEAAA 189

  Fly   191 AES 193
            |.|
plant   190 ANS 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 57/156 (37%)
RABA2cNP_190267.1 PLN03110 1..217 CDD:178657 71/198 (36%)

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