DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and SGP2

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_850622.1 Gene:SGP2 / 821724 AraportID:AT3G21700 Length:292 Species:Arabidopsis thaliana


Alignment Length:169 Identity:37/169 - (21%)
Similarity:77/169 - (45%) Gaps:11/169 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVLVLGDSGVGKSCLLMRF-SDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            |:.:|||..:||:..|.:: .:::..|......||:...:::.:....:...:|:..|.:|....
plant   108 KISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKGINCTDKTLYMGGARISYSIWELEGAERSRDQ 172

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME---- 133
            :|...:.:..||.::|:||..:..::..|.::.|:.....:.| :||.|.|:.....:.::    
plant   173 IPVACKDSVAILFMFDLTSRCTLNSVISWYQQARKSNQTAIPV-MVGTKFDEFIQLPIDLQWTIA 236

  Fly   134 -QGFNYAH--RGALGFEEVSAKSGMNVYDIFSSLAMDIY 169
             |...||.  ...|.|.  ||...:||..||..:...::
plant   237 SQARTYAKALNATLFFS--SASYNINVNKIFKFVTAKLF 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 37/163 (23%)
SGP2NP_850622.1 Spg1 107..289 CDD:206701 37/169 (22%)

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