DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RAB7B

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_188512.1 Gene:RAB7B / 821415 AraportID:AT3G18820 Length:206 Species:Arabidopsis thaliana


Alignment Length:189 Identity:70/189 - (37%)
Similarity:107/189 - (56%) Gaps:19/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||||||:.|:.::.:.:|:.:|..|:|.|...:.|:...|:..||:|||:|.:||.|
plant     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQS 72

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNK--SDDPNHRQV 130
            |..:.||.|...:||||:.|.|||:|::.|.:|.....    |:....:|:|||  .||.|.|.|
plant    73 LGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVV 137

  Fly   131 SMEQGFNY-AHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEE 188
            |.::...: |.:|.:.:.|.|||.|.||.:.|..:|.|            .:.|.:|||
plant   138 SEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKD------------ALKSGEEEE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 63/163 (39%)
RAB7BNP_188512.1 Rab7 9..182 CDD:206655 66/184 (36%)

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