DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABG3c

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_188231.1 Gene:RABG3c / 820855 AraportID:AT3G16100 Length:206 Species:Arabidopsis thaliana


Alignment Length:189 Identity:65/189 - (34%)
Similarity:104/189 - (55%) Gaps:19/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||||||:.|:.:|.:.:|:.:|..|:|.|...:.|::..|:..||:|||:|.:||.|
plant     8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQERFQS 72

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNKSD-DPNHRQVS 131
            |..:.||.|...:||.|:...|||:|::.|.:|.....    |:....:::|||:| |....:|.
plant    73 LGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGKSRVV 137

  Fly   132 MEQGFN--YAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEE 188
            .|:...  .|.:|.:.:.|.|||.|:||...|..:|.            :.:.:|.|||
plant   138 TEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAK------------NALKNEPEEE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/163 (36%)
RABG3cNP_188231.1 Rab7 9..182 CDD:206655 61/184 (33%)

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