DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and RABA1g

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_188124.1 Gene:RABA1g / 820735 AraportID:AT3G15060 Length:217 Species:Arabidopsis thaliana


Alignment Length:166 Identity:64/166 - (38%)
Similarity:106/166 - (63%) Gaps:0/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|:|:||:::||||||||.||.||:.:.|:.:...|:|::...||:.:..:::..|:|||:|.:|
plant    10 YDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.|||||:|...:|:|::.|:||:|......:.::|||||:|..:.|.||.|
plant    75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTE 139

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIY 169
            ....:|.|....|.|.||...:||.:.|:.:...||
plant   140 DAKAFAERENTFFMETSALEALNVENAFTEVLSQIY 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/156 (38%)
RABA1gNP_188124.1 Rab11_like 11..175 CDD:206660 62/163 (38%)

Return to query results.
Submit another query.