DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RAB6A

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_181989.1 Gene:RAB6A / 819069 AraportID:AT2G44610 Length:208 Species:Arabidopsis thaliana


Alignment Length:185 Identity:68/185 - (36%)
Similarity:106/185 - (57%) Gaps:8/185 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            :|::.|||..|||:.::.||..|:|...|..|:|||..::::.|..|.:.||:|||:|.:||.||
plant    10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 74

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            :||..|.:...::|||:.|.:||.|...|:.|:|......|.|:|||||:|..:.||||:|:...
plant    75 IPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEA 139

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAE 192
            .|....:.|.|.|||:|.|:..:|..:|..:        |.....|..::||..:
plant   140 KARELNVMFIETSAKAGFNIKALFRKIAAAL--------PGMETLSSTKQEDMVD 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 63/156 (40%)
RAB6ANP_181989.1 Rab6 10..170 CDD:206654 64/159 (40%)

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