DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and ARA4

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_181842.1 Gene:ARA4 / 818915 AraportID:AT2G43130 Length:214 Species:Arabidopsis thaliana


Alignment Length:165 Identity:62/165 - (37%)
Similarity:99/165 - (60%) Gaps:0/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            :||||::::|||.||||.||.|::.:.|......|:|::.:.:|:.:..:.:..|:|||:|.:||
plant    10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERF 74

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            .::..:.||.|.|.|:|||||.|.:|:|:..|:.|:.......|..:|:|||.|..:.|.||:|:
plant    75 RAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEE 139

  Fly   135 GFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIY 169
            |.:.|....|.|.|.||....||...|..:..:||
plant   140 GKSLAESEGLFFMETSALDSTNVKTAFEMVIREIY 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 58/156 (37%)
ARA4NP_181842.1 Rab11_like 10..174 CDD:206660 60/163 (37%)

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