DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABA5d

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_180726.1 Gene:RABA5d / 817724 AraportID:AT2G31680 Length:219 Species:Arabidopsis thaliana


Alignment Length:165 Identity:61/165 - (36%)
Similarity:99/165 - (60%) Gaps:0/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            :||||::::|||.||||.||.|::.:.|......|:|::.:.:::|:..:.:..|:|||:|.:||
plant    10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQERF 74

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            .::..:.||.|.|.|:||||:...:|:::..|:.|::......|..:|||||.|..:.|.||:|:
plant    75 RAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDLESIRAVSVEE 139

  Fly   135 GFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIY 169
            |...|....|.|.|.||....||...|..:..|||
plant   140 GKALAETEGLFFMETSALDSTNVKTAFEMVIRDIY 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 56/156 (36%)
RABA5dNP_180726.1 Rab11_like 10..174 CDD:206660 59/163 (36%)

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