DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab27b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_085031.3 Gene:Rab27b / 80718 MGIID:1931295 Length:218 Species:Mus musculus


Alignment Length:168 Identity:65/168 - (38%)
Similarity:104/168 - (61%) Gaps:17/168 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSR----------VMML 58
            :|||.|:|.||||||||:..|.|::|::|..|::.|:|||.:.:.|...::          .:.|
Mouse     6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 70

  Fly    59 QVWDTSGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIR--RMC--PDKVTVLLVG 119
            |:|||:|.:||.||..:.:|.|.|.||::|:||.:||.|:..||.:::  ..|  ||   ::|:|
Mouse    71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIG 132

  Fly   120 NKSDDPNHRQVSMEQGFNYAHRGALGFEEVSAKSGMNV 157
            ||:|.|:.|:|:..|....|.:..:.:.|.||.:|.||
Mouse   133 NKADLPDQREVNERQARELAEKYGIPYFETSAATGQNV 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 62/164 (38%)
Rab27bNP_085031.3 Rab27A 6..185 CDD:206700 65/168 (39%)
Effector region. /evidence=ECO:0000250 38..46 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..218
Blue background indicates that the domain is not in the aligned region.

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