DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab30

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_083770.2 Gene:Rab30 / 75985 MGIID:1923235 Length:203 Species:Mus musculus


Alignment Length:188 Identity:69/188 - (36%)
Similarity:114/188 - (60%) Gaps:4/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSG 65
            |..:|:|||::::|::||||:||:.||:...|......|:|:|...::||:....:.||:|||:|
Mouse     3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAG 67

  Fly    66 DKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQV 130
            .:||.|:..|.||||:.::|.||||..:||:.:..|::||.:...:||..:|||||.|....|:|
Mouse    68 QERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREV 132

  Fly   131 SMEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLA----MDIYHRYVLHNPISPMPSE 184
            |.::...::....:.:.|.|||...||..:|..||    .:.....:::|..||:|.|
Mouse   133 SQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGE 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/156 (38%)
Rab30NP_083770.2 Rab30 3..171 CDD:133314 64/167 (38%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 1/7 (14%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 8/15 (53%)

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