DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab9a

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001229903.1 Gene:rab9a / 751756 ZFINID:ZDB-GENE-060825-293 Length:201 Species:Danio rerio


Alignment Length:184 Identity:61/184 - (33%)
Similarity:96/184 - (52%) Gaps:11/184 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSG 65
            ||....|.||::|||.|||||.|:.|:..::|......|:|::...:.:|:..|.:.||:|||:|
Zfish     1 MSSKSSLLKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGRTVTLQIWDTAG 65

  Fly    66 DKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNKSDDPN 126
            .:||.||....||.:...||.:.:..|:||.|:..|.||.....    |:....:::|||. |.:
Zfish    66 QERFRSLRTPFYRGSDCCLLTFSVDDSQSFHNLVNWKKEFIYYADVKEPESFPFVVLGNKL-DVS 129

  Fly   127 HRQVSMEQGFNYA-HRGALGFEEVSAKSGMNVYDIFSS-----LAMDIYHRYVL 174
            .||||.|:...:. ..|...:.|.|||...||...|..     |:::..|.:::
Zfish   130 ERQVSSEEAQEWCMESGGYPYFETSAKDATNVAVAFEEAVRRVLSLEDRHEHLI 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 56/166 (34%)
rab9aNP_001229903.1 Rab9 4..172 CDD:206697 57/168 (34%)

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