DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab13

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_080953.1 Gene:Rab13 / 68328 MGIID:1927232 Length:202 Species:Mus musculus


Alignment Length:165 Identity:83/165 - (50%)
Similarity:112/165 - (67%) Gaps:0/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|:|||:|::|||||||:||::||::|.|...|:.|:|||.|.|:|::..:.:.||||||:|.:|
Mouse     5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQER 69

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.::..:.||.|.||:||||||..|||:||..|||.|:......|..||:|||.|....|||..|
Mouse    70 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQRE 134

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            |....|....:.|.|.||||.:||.:.|||||.||
Mouse   135 QAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 77/156 (49%)
Rab13NP_080953.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 83/164 (51%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..202
Blue background indicates that the domain is not in the aligned region.

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