DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab33ba

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001028764.1 Gene:rab33ba / 572060 ZFINID:ZDB-GENE-050809-122 Length:239 Species:Danio rerio


Alignment Length:203 Identity:65/203 - (32%)
Similarity:112/203 - (55%) Gaps:20/203 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF-N 70
            :||::|:|||||||:||..||...:|.:|...|:|:|.:.:.:|:....:.:|:|||:|.:|| .
Zfish    26 IFKIIVIGDSGVGKTCLTYRFCAGKFPDKTEATIGVDFREKVIEIDGEKIKVQLWDTAGQERFRK 90

  Fly    71 SLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRR-MCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            |::...||:.|.::.|||:|::.||:::..|::|.|: ....:|..:|||||.|..:..|||.:.
Zfish    91 SMVQHYYRNVHAVVFVYDVTNAASFRSLPAWIEECRQHALGQEVPRILVGNKCDLRHAAQVSTDV 155

  Fly   135 GFNYAHRGALGFEEVSAKS-------GMNVYDIFSSLAMDIYHRYVLHNP--ISPMP-------- 182
            ...:|...::...|.|||:       ..|..|...::.|.:.|:.....|  :|..|        
Zfish   156 AQQFADTHSMPLFETSAKNPYGNEDGTQNNSDHVEAIFMTVAHKLKSQKPLVLSQPPCGYGDTVT 220

  Fly   183 -SEQEEED 189
             ..|::||
Zfish   221 LRRQDQED 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 57/165 (35%)
rab33baNP_001028764.1 Rab33B_Rab33A 25..202 CDD:133315 59/175 (34%)

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