DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rabl2

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_009291694.1 Gene:rabl2 / 561568 ZFINID:ZDB-GENE-060503-464 Length:232 Species:Danio rerio


Alignment Length:220 Identity:67/220 - (30%)
Similarity:102/220 - (46%) Gaps:36/220 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGK----SCLLMRFSD---DR-FTE-----KYLRTMGIDVKARSVELVSRVM 56
            |...|::.||||.|||    ||:...|..   || .||     :.|.|..:.:...:..:..:.:
Zfish    17 DEQVKIICLGDSAVGKSKYASCVAKLFISIIVDRILTECISRPQQLSTYALTLYKYTTTINGQTI 81

  Fly    57 MLQVWDTSGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNK 121
            ::..|||:|.:||.|:.||.|..:|..::|:|:....:::|:..|.||:|...|: :..|:|.||
Zfish    82 LVDFWDTAGQERFRSMHPSYYHKSHACVMVFDVQRKITYKNLTVWYKELREYRPE-IPCLVVANK 145

  Fly   122 SD-DPNHRQVSMEQGFNYAHRGALGFEEVSAKSGMNVYDIF-------------SSLAMDIYHR- 171
            .| |....|.|    ||:|.:..|.|..|||..|.||..:|             ||..||...| 
Zfish   146 IDADMKVTQKS----FNFAKKQGLPFYFVSAADGTNVVKVFKDAIQMALSYKRNSSDFMDEVMRE 206

  Fly   172 ---YVLHNPISPMPSEQEEEDAAES 193
               :.|.|.......|:.:|:...|
Zfish   207 LENFDLENKEESSDKEETQEEKPSS 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 58/183 (32%)
rabl2XP_009291694.1 P-loop containing Nucleoside Triphosphate Hydrolases 20..193 CDD:476819 56/177 (32%)

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