DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RABL6

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001167459.1 Gene:RABL6 / 55684 HGNCID:24703 Length:730 Species:Homo sapiens


Alignment Length:234 Identity:53/234 - (22%)
Similarity:94/234 - (40%) Gaps:59/234 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKA--RSVELVSRVMMLQVWDT----S 64
            |..|:::.||...||:.|..|.....|.|:|:.|..|.|.:  .|.:....::.::|||.    .
Human    42 YNMKIVIRGDRNTGKTALWHRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWDVVDKGK 106

  Fly    65 GDKRFNSLMPSN------------------YRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPD 111
            ..||.:.|...|                  |::.:|:::::|||...:|..|   ::|:.:: |.
Human   107 CKKRGDGLKMENDPQEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYI---LRELPKV-PT 167

  Fly   112 KVTVLLVGNKSDDPNHRQV-------------SMEQGFNYAHRGALGFEEVSAKSGMNV------ 157
            .|.|.::||..|...||.:             |...|.:|     ..:.|.|.|:...:      
Human   168 HVPVCVLGNYRDMGEHRVILPDDVRDFIDNLDSRPPGSSY-----FRYAESSMKNSFGLKYLHKF 227

  Fly   158 YDI-FSSLAMDIYHRYVLHN------PISPMPSEQEEED 189
            ::| |..|..:...|.:..|      .:..:..:||.||
Human   228 FNIPFLQLQRETLLRQLETNQLDMDATLEELSVQQETED 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 45/200 (23%)
RABL6NP_001167459.1 P-loop containing Nucleoside Triphosphate Hydrolases 44..222 CDD:476819 43/186 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..730
PRK07764 <408..594 CDD:236090
Interaction with CDKN2A. /evidence=ECO:0000269|PubMed:16582619 656..694
Blue background indicates that the domain is not in the aligned region.

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