DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab18

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001017281.1 Gene:rab18 / 550035 XenbaseID:XB-GENE-489852 Length:206 Species:Xenopus tropicalis


Alignment Length:161 Identity:64/161 - (39%)
Similarity:98/161 - (60%) Gaps:2/161 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSLM 73
            |:|::|:||||||.||:||:||.|..:...|:|:|.|.:::.:......|.:|||:|.:||.:|.
 Frog    10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLT 74

  Fly    74 PSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCP-DKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            ||.||.|.|::||||:|...:|..:|.|:.|:...|. :.:..:|||||.|..| |:|...:|..
 Frog    75 PSYYRGAQGVILVYDVTRRDTFTRLDNWLNELETYCTRNDIVKMLVGNKIDKEN-REVDRNEGLK 138

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            :|.:.::.|.|.|||:...|...|..|...|
 Frog   139 FARKHSMLFIEASAKTRDGVQCAFEELVEKI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 62/156 (40%)
rab18NP_001017281.1 Rab18 9..169 CDD:206656 63/159 (40%)

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