DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab19

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001017246.1 Gene:rab19 / 550000 XenbaseID:XB-GENE-495128 Length:213 Species:Xenopus tropicalis


Alignment Length:197 Identity:68/197 - (34%)
Similarity:112/197 - (56%) Gaps:5/197 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            ||:|||::::|||.|||:|::.||....|......|:|:|...|::.:..:.:.:|||||:|.:|
 Frog    12 FDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQER 76

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.::..|.||||||.::.||||..:||:::..|:.|..:.....:.::|:|||||....||:..|
 Frog    77 FRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFE 141

  Fly   134 QGFNYAHR-GALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLH----NPISPMPSEQEEEDAAES 193
            :....|.: |.|...|.|||...||.::|..:|.::..|...|    :|.:....:.:...|...
 Frog   142 EACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHSESPRNSFMLDSKPVLAPPE 206

  Fly   194 PD 195
            ||
 Frog   207 PD 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 58/157 (37%)
rab19NP_001017246.1 Rab19 13..177 CDD:133267 61/163 (37%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 37..52 3/14 (21%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 72..87 5/14 (36%)

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