DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab10

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_059055.2 Gene:Rab10 / 50993 RGDID:620879 Length:200 Species:Rattus norvegicus


Alignment Length:176 Identity:78/176 - (44%)
Similarity:114/176 - (64%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|.|||:|::|||||||:|:|.|||||.|...::.|:|||.|.::|||..:.:.||:|||:|.:|
  Rat     6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |:::..|.||.|.||:||||||:.|||:||..|::.|.....:.|..:|:|||.|..:.|.|...
  Rat    71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKG 135

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPIS 179
            :|...|....:.|.|.|||:.:|:...|.:||.||..:..:..|.|
  Rat   136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 70/156 (45%)
Rab10NP_059055.2 Rab8_Rab10_Rab13_like 7..173 CDD:206659 76/165 (46%)

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