DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab7b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001102798.1 Gene:Rab7b / 501854 RGDID:1562617 Length:199 Species:Rattus norvegicus


Alignment Length:167 Identity:52/167 - (31%)
Similarity:93/167 - (55%) Gaps:4/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSLM 73
            |::::|..||||:.||.::....|.|:|..|:|..:.::.:.|....:.||:|||.|.:||.|::
  Rat    10 KLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMV 74

  Fly    74 PSNYRSAHGILLVYDITSSKSFQNIDGWMKEI-RRMCP--DKVTVLLVGNKSDDPNHRQVSMEQG 135
            .:.|:.:.|.:|.:|:|..:||:.:|.|..:: .::.|  ....::::|||. |...|:|..|..
  Rat    75 STFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPMEQSYPMVVLGNKI-DLEDRKVPQEVA 138

  Fly   136 FNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRY 172
            ..:.....:.:.|||||:.:||...|..||.....||
  Rat   139 HEWCKEKDMPYFEVSAKNDINVVQAFEVLASRALLRY 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 48/158 (30%)
Rab7bNP_001102798.1 Rab 9..169 CDD:206640 49/159 (31%)

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