DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab19

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001019497.1 Gene:Rab19 / 500088 RGDID:1565263 Length:217 Species:Rattus norvegicus


Alignment Length:198 Identity:68/198 - (34%)
Similarity:112/198 - (56%) Gaps:17/198 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            ||||||:::|||.|||:|::..|....::|....|:|:|...||:|:..:.:.:|||||:|.:||
  Rat    15 DYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERF 79

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            .::..|.|||||..::.||:|...:|:::..|:.||.:.....:.::|:|||||....|.|..|.
  Rat    80 RTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFED 144

  Fly   135 GFNYAHR-GALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLH--------------NP--ISPMP 182
            ....|.: |.|...|.|||...|:.::|..:|.::..|..||              :|  ::.:|
  Rat   145 ACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHLYGESAQQGLPQDSSPVLVAHVP 209

  Fly   183 SEQ 185
            ||:
  Rat   210 SER 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 57/157 (36%)
Rab19NP_001019497.1 Rab19 15..179 CDD:133267 61/163 (37%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 3/14 (21%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 5/14 (36%)

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