DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab11b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001011048.1 Gene:rab11b / 496458 XenbaseID:XB-GENE-491174 Length:218 Species:Xenopus tropicalis


Alignment Length:183 Identity:68/183 - (37%)
Similarity:112/183 - (61%) Gaps:1/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :||||||:::||||||||.||.||:.:.|..:...|:|::...||:::..:.:..|:|||:|.:|
 Frog     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.||||||....:::|::.|:||:|....:.:.::|||||||..:.|.|..:
 Frog    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTD 137

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQE 186
            :...:|.:..|.|.|.||....||.:.|.::..:|| |.|....|:...:..|
 Frog   138 EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIY-RIVSQKQIADRSAHDE 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/156 (38%)
rab11bNP_001011048.1 Rab11_like 9..173 CDD:206660 62/163 (38%)

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