DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and zgc:101559

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001007418.1 Gene:zgc:101559 / 492776 ZFINID:ZDB-GENE-041114-122 Length:233 Species:Danio rerio


Alignment Length:203 Identity:68/203 - (33%)
Similarity:107/203 - (52%) Gaps:31/203 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF-N 70
            :||::|:|||.|||:||..||...:|......|:|:|.:.|:::|....:.||:|||:|.:|| .
Zfish    36 VFKIIVIGDSNVGKTCLTYRFCGGKFLSNPEATIGVDFRERTLQLDGENIKLQIWDTAGQERFRK 100

  Fly    71 SLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEI-RRMCPDKVTVLLVGNKSDDPNHRQVS--- 131
            |::...||:.|.|:.|||:||..||:::..|::|. ....|..|..:|||||.|....|:||   
Zfish   101 SMVEHYYRNVHAIIFVYDVTSLASFESLPEWIEECNHHSVPPMVPRILVGNKCDLRESREVSTFL 165

  Fly   132 ---MEQGFNYAHRGALGFEEVSAK---SGMNVYDIFSSLAMDIYHRYVLHNPIS----------P 180
               :...:|:.      ..|.||:   ...:|..||.:||    :|...|.|:.          .
Zfish   166 AQRLADSYNFP------LFETSARDLAEKEHVDAIFLTLA----YRLKNHRPLRLKQPSESNFIQ 220

  Fly   181 MPSEQEEE 188
            :.:||||:
Zfish   221 LAAEQEEK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/167 (35%)
zgc:101559NP_001007418.1 Rab33B_Rab33A 35..204 CDD:133315 62/177 (35%)

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