DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab11a

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001007360.1 Gene:rab11a / 492487 ZFINID:ZDB-GENE-041114-53 Length:215 Species:Danio rerio


Alignment Length:190 Identity:69/190 - (36%)
Similarity:114/190 - (60%) Gaps:5/190 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :||||||:::||||||||.||.||:.:.|..:...|:|::...||:::..:.:..|:|||:|.:|
Zfish     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQER 72

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::..:.||.|.|.||||||....:::|::.|:||:|......:.::|||||||..:.|.|..:
Zfish    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTD 137

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAES 193
            :...:|.:..|.|.|.||....||...|.::..:|| |.|....:    |::.:.|.:.|
Zfish   138 EARAFAEKNGLSFLETSALDSTNVETAFQTILTEIY-RIVSQKQM----SDRRDNDMSPS 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/156 (38%)
rab11aNP_001007360.1 Rab11_like 9..173 CDD:206660 62/163 (38%)

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