DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab5b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001005723.1 Gene:rab5b / 448258 XenbaseID:XB-GENE-489150 Length:215 Species:Xenopus tropicalis


Alignment Length:158 Identity:62/158 - (39%)
Similarity:96/158 - (60%) Gaps:0/158 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            ||:::||:|.||||.|::||...:|.|....|:|.....:||.|....:..::|||:|.:|::||
 Frog    21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSL 85

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            .|..||.|...::|||||:.::|.....|:||::|.....:.:.|.|||:|..:.|.|..|:...
 Frog    86 APMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKADLTSKRMVEYEEAQA 150

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLA 165
            ||...:|.|.|.|||:.|||.|:|.::|
 Frog   151 YADDNSLLFMETSAKTAMNVNDLFLAIA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/156 (39%)
rab5bNP_001005723.1 Rab5_related 20..182 CDD:206653 62/158 (39%)

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