DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab30

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001006108.1 Gene:rab30 / 448082 XenbaseID:XB-GENE-479337 Length:203 Species:Xenopus tropicalis


Alignment Length:188 Identity:68/188 - (36%)
Similarity:112/188 - (59%) Gaps:4/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSG 65
            |..:|:|||::::|::||||:||:.||:...|......|:|:|...::||:....:.||:|||:|
 Frog     3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKIKLQIWDTAG 67

  Fly    66 DKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQV 130
            .:||.|:..|.||||:.::|.||||..:||:.:..|::||.:....:|..:|||||.|....|:|
 Frog    68 QERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYANSEVITVLVGNKIDLAERREV 132

  Fly   131 SMEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLA----MDIYHRYVLHNPISPMPSE 184
            |.::...:|....:.:.|.|||...||..:|..||    .:.....:::|..|.:|.|
 Frog   133 SQQRAEEFAGTQNMYYLETSAKESDNVEKLFLDLACRLISEARQNALVNNVDSSLPGE 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 59/156 (38%)
rab30NP_001006108.1 Rab30 3..171 CDD:133314 64/167 (38%)

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