DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and cplane2

DIOPT Version :9

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001004649.1 Gene:cplane2 / 447911 ZFINID:ZDB-GENE-040912-80 Length:252 Species:Danio rerio


Alignment Length:199 Identity:51/199 - (25%)
Similarity:88/199 - (44%) Gaps:17/199 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV-----KARSVELVSRVMM--LQVWD--T 63
            :||.:.|.:|||||.|..|.:.....:.:..|.||:.     ..|..| ..||:.  .::||  .
Zfish    54 YKVFLSGKTGVGKSALAARLAGLDLPKMHYETTGIETTVVFWPVRLKE-SGRVLFFRFELWDCGE 117

  Fly    64 SGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHR 128
            |..:||:.::.|.......||.::..|...||.::...:..|... .|:|..|:||.|.|...|.
Zfish   118 SAMRRFDHMLLSCKEKVDAILFLFSFTDRGSFDDLTNQISRITEP-SDRVVKLVVGTKFDLFMHT 181

  Fly   129 QVSMEQGFNYAHRGALGF----EEVSAKSGMNVYDIFSSLAMDIYHR-YVLHNPISPMPSEQEEE 188
            .|:.....::.....|..    .:|||..| .|..:.::||.:::|: .:..:.:|..|.....|
Zfish   182 DVTESDVTHFQEVWGLPVFRVGGDVSAGLG-EVAPLLNALAENLWHQDCMAASSVSISPQAALRE 245

  Fly   189 DAAE 192
            .::|
Zfish   246 TSSE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 RAB 8..171 CDD:197555 46/175 (26%)
Rab 8..165 CDD:206640 44/169 (26%)
cplane2NP_001004649.1 Small GTPase-like 46..252 51/199 (26%)
Gem1 52..>194 CDD:224025 38/141 (27%)
P-loop_NTPase 54..>184 CDD:304359 37/131 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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