DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RabX1

DIOPT Version :9

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster


Alignment Length:162 Identity:54/162 - (33%)
Similarity:90/162 - (55%) Gaps:2/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVLVLGDSGVGKSCLLMRFSDDRF--TEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            ||||||..||||:.|::|:..:..  .|..:.|:.:.....::.|....:.||:|||:|.:|:.:
  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGF 136
            :.|..||:|:..:||:|:|..|:|..|..|::|:.|...|.:.:.|||||.|....|.||.|:.|
  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136

  Fly   137 NYAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            .:|......:.|.|.::...:..:|.|.|..:
  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGL 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 RAB 8..171 CDD:197555 54/162 (33%)
Rab 8..165 CDD:206640 53/157 (34%)
RabX1NP_524713.1 Ras 7..166 CDD:278499 53/158 (34%)
Rab 7..166 CDD:206640 53/158 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454293
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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