DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and rab10

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001002566.1 Gene:rab10 / 436839 ZFINID:ZDB-GENE-040718-304 Length:201 Species:Danio rerio


Alignment Length:176 Identity:78/176 - (44%)
Similarity:115/176 - (65%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|.|||:|::|||||||:|:|.|||||.|...::.|:|||.|.::|||..:.:.||:|||:|.:|
Zfish     6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |:::..|.||.|.||:||||||::|||:||..|::.|.....:.|..:|:|||.|..:.|.|...
Zfish    71 FHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKA 135

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPIS 179
            :|...|....:.|.|.|||:.:|:...|.:||.||..:..:..|.|
Zfish   136 KGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPNS 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 70/156 (45%)
rab10NP_001002566.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 76/165 (46%)

Return to query results.
Submit another query.