DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RabX4

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster


Alignment Length:194 Identity:74/194 - (38%)
Similarity:108/194 - (55%) Gaps:20/194 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            :||||||||.|||:|::.|:.|:::.:.|:.|:|||.|.:.:.|....:.||:|||:|.:||.:|
  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSD-DPNHRQVSMEQGF 136
            ..:.||.|.||||:||:|:.:|:.|:..|::.|:......|..:|.|||.: ....|.|..|:|.
  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138

  Fly   137 NYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEE-----DAAESPD 195
            ..|....:.|.|||.||.:|:.|.|.|||..|              .||.|.     |..||.|
  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKI--------------REQRERRGDNFDNDESKD 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 64/157 (41%)
RabX4NP_733043.1 RAB 9..170 CDD:197555 66/160 (41%)

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