DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab7

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster


Alignment Length:194 Identity:68/194 - (35%)
Similarity:104/194 - (53%) Gaps:18/194 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||.|||:.|:.::.:.||:.:|..|:|.|...:.|.:..||:.:|:|||:|.:||.|
  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNKSDDPNHRQVSM 132
            |..:.||.|...:||||:|:..||:|:|.|..|.....    ||....:::|||.|..| ||||.
  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN-RQVST 136

  Fly   133 EQGFNYAH-RGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAESPD 195
            .:...:.. :..:.:.|.|||.|:||...|..:|.            :.:..|.|.|...:.||
  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAK------------NALELEAEAEVINDFPD 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/161 (38%)
Rab7NP_524472.1 Rab7 9..179 CDD:206655 63/182 (35%)

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